Varaico: Literature-Extracted Genetic Variants

Gene:ERCC2
Variant:p.C259Y
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ERCC2

NM_000400.4:p.C259Y

Associated Papers

Germline pathogenic variation impacts somatic alterations and patient outcomes in pediatric central nervous system tumors.

Corbett RJ et al.

Nature Communications, 2025

41271695 (PubMed )
Supplement: 41467_2025_65190_MOESM13_ESM.xlsx › germline_snv_indel

Germline genetic variation impacts clonal hematopoiesis landscape and progression to malignancy.

Liu J et al.

Nature Genetics, 2025

40664769 (PubMed )
Supplement: 41588_2025_2250_MOESM4_ESM.xlsx › ST6

Germline pathogenic variation impacts somatic alterations and patient outcomes in pediatric CNS tumors.

Corbett RJ et al.

Medrxiv : the Preprint Server for Health Sciences, 2025

39974082 (PubMed )
Supplement: media-12.xlsx › TableS11A-germline_snv_indel

Trichothiodystrophy-causative pathogenic variants impair a cooperative action of TFIIH and DDX1 in R-loop processing.

Ferri D et al.

Nucleic Acids Research, 2025

40757642 (PubMed )
Supplement: gkaf745_supplemental_file.pdf

Nucleotide Excision Repair: Insights into Canonical and Emerging Functions of the Transcription/DNA Repair Factor TFIIH.

Zachayus A et al.

Genes, 2025

The role of Transcription Factor IIH complex in nucleotide excision repair.

Hoag A et al.

Environmental and Molecular Mutagenesis, 2024

The evolutionary impact of childhood cancer on the human gene pool.

Stoltze UK et al.

Nature Communications, 2024

38424437 (PubMed )
Supplement: 41467_2024_45975_MOESM4_ESM.xlsx › Supplementary_Data_5

TFIIH central activity in nucleotide excision repair to prevent disease.

Theil AF et al.

Dna Repair, 2023

Facial clues to the photosensitive trichothiodystrophy phenotype in childhood.

Pascolini G et al.

Journal of Human Genetics, 2023

Dynamic conformational switching underlies TFIIH function in transcription and DNA repair and impacts genetic diseases.

Yu J et al.

Nature Communications, 2023

37179334 (PubMed )
Supplement: 41467_2023_38416_MOESM3_ESM.pdf

TFIIH stabilization recovers the DNA repair and transcription dysfunctions in thermo-sensitive trichothiodystrophy.

Lanzafame M et al.

Human Mutation, 2022

Uncovering the Contribution of Moderate-Penetrance Susceptibility Genes to Breast Cancer by Whole-Exome Sequencing and Targeted Enrichment Sequencing of Candidate Genes in Women of European Ancestry.

Dumont M et al.

Cancers, 2022

35884425 (PubMed )
Supplement: cancers-14-03363-s001.zip › Table_S5-final_16052022.xlsx › Table_S5B

Decoding Cancer Variants of Unknown Significance for Helicase-Nuclease-RPA Complexes Orchestrating DNA Repair During Transcription and Replication.

Tsutakawa SE et al.

Frontiers in Molecular Biosciences, 2021

Pathogenic Germline Mutations in DNA Repair Genes in Combination With Cancer Treatment Exposures and Risk of Subsequent Neoplasms Among Long-Term Survivors of Childhood Cancer.

Qin N et al.

Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology, 2020

TAPES: A tool for assessment and prioritisation in exome studies.

Xavier A et al.

Plos Computational Biology, 2019

31613886 (PubMed )
Supplement: pcbi.1007453.s002.xlsx › SoftVsPanel

Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.

Yan C et al.

Nature Structural & Molecular Biology, 2019

31110295 (PubMed )
Supplement: NIHMS1525853-supplement-3.pdf

CharGer: clinical Characterization of Germline variants.

Scott AD et al.

Bioinformatics (oxford, England), 2019

30102335 (PubMed )
Supplement: bioinformatics_35_5_865_s4.xlsx › SupplTable2

Use of Big Data to Estimate Prevalence of Defective DNA Repair Variants in the US Population.

Pugh J et al.

Jama Dermatology, 2019

The cryo-electron microscopy structure of human transcription factor IIH.

Greber BJ et al.

Nature, 2017

Identification of Damaging nsSNVs in HumanERCC2 Gene.

Fang S et al.

Chemical Biology & Drug Design, 2016

Role of XPD in cellular functions: To TFIIH and beyond.

Houten BV et al.

Dna Repair, 2016

BRAF Inhibition in BRAFV600E-Positive Anaplastic Thyroid Carcinoma.

Lim AM et al.

Journal of the National Comprehensive Cancer Network : Jnccn, 2016

GESPA: classifying nsSNPs to predict disease association.

Khurana JK et al.

Bmc Bioinformatics, 2015

26206375 (PubMed )
Supplement: 12859_2015_673_MOESM2_ESM.xls › Sheet1

In TFIIH, XPD helicase is exclusively devoted to DNA repair.

Kuper J et al.

Plos Biology, 2014

XPD mutations in trichothiodystrophy hamper collagen VI expression and reveal a role of TFIIH in transcription derepression.

Orioli D et al.

Human Molecular Genetics, 2013

ARCH domain of XPD, an anchoring platform for CAK that conditions TFIIH DNA repair and transcription activities.

Abdulrahman W et al.

Proceedings of the National Academy of Sciences of the United States of America, 2013

DNA helicases associated with genetic instability, cancer, and aging.

Suhasini AN et al.

Advances in Experimental Medicine and Biology, 2013

Disorders of nucleotide excision repair: the genetic and molecular basis of heterogeneity.

Cleaver JE et al.

Nature Reviews. Genetics, 2009

Structure, function and evolution of the XPD family of iron-sulfur-containing 5'-->3' DNA helicases.

White MF

Biochemical Society Transactions, 2009

XPD structure reveals its secrets.

Lehmann AR

Dna Repair, 2008

Crystal structure of the FeS cluster-containing nucleotide excision repair helicase XPD.

Wolski SC et al.

Plos Biology, 2008

Structure of the DNA repair helicase XPD.

Liu H et al.

Cell, 2008

Structural and functional characterization of the human DNA repair helicase XPD by comparative molecular modeling and site-directed mutagenesis of the bacterial repair protein UvrB.

Bienstock RJ et al.

The Journal of Biological Chemistry, 2003

Reduced level of the repair/transcription factor TFIIH in trichothiodystrophy.

Botta E et al.

Human Molecular Genetics, 2002

Identification of ICR170-induced XPD mutations in UV-sensitive CHO cells.

Tebbs RS et al.

Environmental and Molecular Mutagenesis, 2001

A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy.

Cleaver JE et al.

Human Mutation, 1999

Analysis of mutations in the XPD gene in Italian patients with trichothiodystrophy: site of mutation correlates with repair deficiency, but gene dosage appears to determine clinical severity.

Botta E et al.

American Journal of Human Genetics, 1998

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."