Varaico: Literature-Extracted Genetic Variants

Gene:OCA2
Variant:p.H615R
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OCA2

NM_000275.3:p.H615R

Associated Papers

Comprehensive Profiling of Genetic and Nongenetic Factors that Influence Skin Traits in Asian Women from 4 Countries.

Moon H et al.

The Journal of Investigative Dermatology, 2025

Polygenic Risk Score Analysis of 37 SNPs Associated with Melanoma Risk in Colombian Population.

Tovar-Parra D et al.

International Journal of Molecular Sciences, 2025

40429816 (PubMed )
Supplement: ijms-26-04674-s001.zip › ijms-3524919-supplementary.xlsx › Table_S2

Genomic characteristics and immune landscape of super multiple primary lung cancer.

Yang Z et al.

Ebiomedicine, 2024

38364701 (PubMed )
Supplement: mmc2.xlsx › all_212.somatic.igv_recheck.mut

Two High-Quality Cygnus Genome Assemblies Reveal Genomic Variations Associated with Plumage Color.

Chong Y et al.

International Journal of Molecular Sciences, 2023

Native American genetic ancestry and pigmentation allele contributions to skin color in a Caribbean population.

Ang KC et al.

Elife, 2023

Large-scale genome sequencing redefines the genetic footprints of high-altitude adaptation in Tibetans.

Zheng W et al.

Genome Biology, 2023

A Late Pleistocene human genome from Southwest China.

Zhang X et al.

Current Biology : Cb, 2022

A Genome-Wide Scan on Individual Typology Angle Found Variants at SLC24A2 Associated with Skin Color Variation in Chinese Populations.

Wang F et al.

The Journal of Investigative Dermatology, 2022

Non-polyalanine repeat mutation in PHOX2B is detected in autopsy cases of sudden unexpected infant death.

Ueda A et al.

Plos One, 2022

35486589 (PubMed )
Supplement: pone.0267751.s001.xls › SIDS3-full

Genetic Analysis of 28 Chinese Families With Tyrosinase-Positive Oculocutaneous Albinism.

Ma L et al.

Frontiers in Genetics, 2021

The distinctive geographic patterns of common pigmentation variants at the OCA2 gene.

Kidd KK et al.

Scientific Reports, 2020

Exploring the possibility of predicting human head hair greying from DNA using whole-exome and targeted NGS data.

Pośpiech E et al.

Bmc Genomics, 2020

32758128 (PubMed )
Supplement: 12864_2020_6926_MOESM1_ESM.pdf

NGS-based targeted resequencing identified rare subtypes of albinism: Providing accurate molecular diagnosis for Japanese patients with albinism.

Okamura K et al.

Pigment Cell & Melanoma Research, 2019

Shades of complexity: New perspectives on the evolution and genetic architecture of human skin.

Quillen EE et al.

American Journal of Physical Anthropology, 2019

Variants at the OCA2/HERC2 locus affect time to first cutaneous squamous cell carcinoma in solid organ transplant recipients collected using two different study designs.

Wei L et al.

The British Journal of Dermatology, 2017

Identifying signatures of positive selection in pigmentation genes in two South Asian populations.

Jonnalagadda M et al.

American Journal of Human Biology : the Official Journal of the Human Biology Council, 2017

Skin Pigmentation Genetics for the Clinic.

Ainger SA et al.

Dermatology (basel, Switzerland), 2017

Genome-wide association study of pigmentary traits (skin and iris color) in individuals of East Asian ancestry.

Rawofi L et al.

Peerj, 2017

Association of genetic variants with skin pigmentation phenotype among populations of west Maharashtra, India.

Jonnalagadda M et al.

American Journal of Human Biology : the Official Journal of the Human Biology Council, 2016

Importance of nonsynonymous OCA2 variants in human eye color prediction.

Andersen JD et al.

Molecular Genetics & Genomic Medicine, 2016

A Genetic Mechanism for Convergent Skin Lightening during Recent Human Evolution.

Yang Z et al.

Molecular Biology and Evolution, 2016

Estimating the Ages of Selection Signals from Different Epochs in Human History.

Nakagome S et al.

Molecular Biology and Evolution, 2016

26545921 (PubMed )
Supplement: msv256_Supplementary_Data.zip › Resubmission_SOM_2015_notes_v13.pdf

Iris pigmentation as a quantitative trait: variation in populations of European, East Asian and South Asian ancestry and association with candidate gene polymorphisms.

Edwards M et al.

Pigment Cell & Melanoma Research, 2016

Genetic analyses of oculocutaneous albinism types 2 and 4 with eight novel mutations.

Okamura K et al.

Journal of Dermatological Science, 2016

Deep History of East Asian Populations Revealed Through Genetic Analysis of the Ainu.

Jeong C et al.

Genetics, 2016

Variants in melanogenesis-related genes associate with skin cancer risk among Japanese populations.

Yoshizawa J et al.

The Journal of Dermatology, 2014

Computational screening of disease-associated mutations in OCA2 gene.

Kamaraj B et al.

Cell Biochemistry and Biophysics, 2014

Implications of the admixture process in skin color molecular assessment.

Cerqueira CC et al.

Plos One, 2014

24809478 (PubMed )
Supplement: pone.0096886.s001.docx

Association of melanogenesis genes with skin color variation among Japanese females.

Abe Y et al.

Journal of Dermatological Science, 2013

A global view of the OCA2-HERC2 region and pigmentation.

Donnelly MP et al.

Human Genetics, 2012

Distribution of OCA2∗481Thr and OCA2∗615Arg, associated with hypopigmentation, in several additional populations.

Yuasa I et al.

Legal Medicine (tokyo, Japan), 2011

Screening of TYR, OCA2, GPR143, and MC1R in patients with congenital nystagmus, macular hypoplasia, and fundus hypopigmentation indicating albinism.

Preising MN et al.

Molecular Vision, 2011

Association of the OCA2 polymorphism His615Arg with melanin content in east Asian populations: further evidence of convergent evolution of skin pigmentation.

Edwards M et al.

Plos Genetics, 2010

Variants of the melanocortin 1 receptor gene (MC1R) and P gene as indicators of the population origin of an individual.

Masui S et al.

International Journal of Legal Medicine, 2009

Molecular genetics of human pigmentation diversity.

Sturm RA

Human Molecular Genetics, 2009

Genome-wide analysis to predict protein sequence variations that change phosphorylation sites or their corresponding kinases.

Ryu GM et al.

Nucleic Acids Research, 2009

19139070 (PubMed )
Supplement: gkn1008_nar-01723-s-2008-File009.xls › TypeII_

SLC45A2: a novel malignant melanoma-associated gene.

Fernandez LP et al.

Human Mutation, 2008

Two novel splice mutations of P gene in a Thai-Chinese patient with oculocutaneous albinism type II (OCA2).

Wattanasirichaigoon D et al.

Journal of Dermatological Science, 2008

Distribution of two Asian-related coding SNPs in the MC1R and OCA2 genes.

Yuasa I et al.

Biochemical Genetics, 2007

Six novel P gene mutations and oculocutaneous albinism type 2 frequency in Japanese albino patients.

Suzuki T et al.

The Journal of Investigative Dermatology, 2003

P gene as an inherited biomarker of human eye color.

Rebbeck TR et al.

Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association for Cancer Research, Cosponsored by the American Society of Preventive Oncology, 2002

Hypopigmentation in the Prader-Willi syndrome correlates with P gene deletion but not with haplotype of the hemizygous P allele.

Spritz RA et al.

American Journal of Medical Genetics, 1997

Association study confirms the role of two OCA2 polymorphisms in normal skin pigmentation variation in East Asian populations.

Eaton K et al.

American Journal of Human Biology : the Official Journal of the Human Biology Council, 0

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