Varaico: Literature-Extracted Genetic Variants

Gene:TPCN2
Variant:p.G734E
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TPCN2

NM_139075.4:p.G734E

Associated Papers

Whole-Genome Sequencing Reveals a Novel GATA2 Mutation in Lower-Grade Glioma: Bioinformatics Analysis of Functional and Therapeutic Implications.

Handoko et al.

Cancers, 2025

41154393 (PubMed )
Supplement: cancers-17-03338-s001.zip › Table_S1._SNV_Analysis.xlsx › SNV_Analysis

TPCs: FROM PLANT TO HUMAN.

Klingl YE et al.

Physiological Reviews, 2025

A patient with TPCN2-related hypopigmentation and ocular phenotype.

Courdier C et al.

European Journal of Human Genetics : Ejhg, 2025

Proteogenomic Profiling of Treatment-Naïve Metastatic Malignant Melanoma.

Kuras M et al.

Cancers, 2025

40075679 (PubMed )
Supplement: cancers-17-00832-s001.zip › Table_S5._SAAVs.xlsx › Table_S5A

TPC2: From Blond Hair to Melanoma?

Abrahamian C et al.

Cancers, 2024

Rab7a is an enhancer of TPC2 activity regulating melanoma progression through modulation of the GSK3β/β-Catenin/MITF-axis.

Abrahamian C et al.

Nature Communications, 2024

Population-specific putative causal variants shape quantitative traits.

Koyama S et al.

Nature Genetics, 2024

39363016 (PubMed )
Supplement: 41588_2024_1913_MOESM3_ESM.xlsx › ST8_Missense_PPI___0.1

Whole-exome sequencing identifies cancer-associated variants of the endo-lysosomal ion transport channels in the Saudi population.

Binobaid L et al.

Saudi Pharmaceutical Journal : Spj : the Official Publication of the Saudi Pharmaceutical Society, 2024

Identification of a novel Scn3b mutation in a Chinese Brugada syndrome pedigree: implications for Nav1.5 electrophysiological properties and intracellular distribution of Nav1.5 and Navβ3.

Fan J et al.

Frontiers in Cardiovascular Medicine, 2024

38450374 (PubMed )
Supplement: Table9.xls › Sheet2

A novel gain of function mutation in TPC2 reiterates pH-pigmentation interplay: Emerging role of ionic homeostasis as a master pigmentation regulator.

Sharma N et al.

Cell Calcium, 2023

A gain-of-function TPC2 variant R210C increases affinity to PI(3,5)P2 and causes lysosome acidification and hypopigmentation.

Wang Q et al.

Nature Communications, 2023

TPC2 rescues lysosomal storage in mucolipidosis type IV, Niemann-Pick type C1, and Batten disease.

Scotto Rosato A et al.

Embo Molecular Medicine, 2022

Electrophysiology of Endolysosomal Two-Pore Channels: A Current Account.

Patel S et al.

Cells, 2022

A large Canadian cohort provides insights into the genetic architecture of human hair colour.

Lona-Durazo F et al.

Communications Biology, 2021

34737440 (PubMed )
Supplement: 42003_2021_2764_MOESM2_ESM.pdf

Two-pore and TRPML cation channels: Regulators of phagocytosis, autophagy and lysosomal exocytosis.

Rosato AS et al.

Pharmacology & Therapeutics, 2021

Human genome diversity data reveal that L564P is the predominant TPC2 variant and a prerequisite for the blond hair associated M484L gain-of-function effect.

Böck J et al.

Plos Genetics, 2021

Introducing the first whole genomes of nationals from the United Arab Emirates.

AlSafar HS et al.

Scientific Reports, 2019

31604968 (PubMed )
Supplement: 41598_2019_50876_MOESM1_ESM.xlsx › UAE_S001

On the structure and mechanism of two-pore channels.

Kintzer AF et al.

The Febs Journal, 2018

TPC2 polymorphisms associated with a hair pigmentation phenotype in humans result in gain of channel function by independent mechanisms.

Chao YK et al.

Proceedings of the National Academy of Sciences of the United States of America, 2017

Specific loss of CatSper function is sufficient to compromise fertilizing capacity of human spermatozoa.

Williams HL et al.

Human Reproduction (oxford, England), 2015

26453676 (PubMed )
Supplement: supp_dev243_dev243supp_table2.pdf

Lysoplex: An efficient toolkit to detect DNA sequence variations in the autophagy-lysosomal pathway.

Di Fruscio G et al.

Autophagy, 2015

26075876 (PubMed )
Supplement: kaup-11-06-1043077-s001.zip › 1043077_supplemental_files › TABLE_S6.xlsx › results

The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data.

Tang X et al.

Nucleic Acids Research, 2014

25352556 (PubMed )
Supplement: supp_gku1005_nar-01266-met-n-2014-File012.xlsx › TCGA-A8-A06Q-01A.domain

DNA polymorphisms: what they are and their role in human pigmentation.

Kosmadaki MG et al.

Actas Dermo-sifiliograficas, 2009

Molecular genetics of human pigmentation diversity.

Sturm RA

Human Molecular Genetics, 2009

Two newly identified genetic determinants of pigmentation in Europeans.

Sulem P et al.

Nature Genetics, 2008

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."