Varaico: Literature-Extracted Genetic Variants

Gene:USH2A
Variant:p.R317R
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USH2A

NM_206933.4:p.R317R

Associated Papers

Cystoid Macular Edema in Non-Syndromic Retinitis Pigmentosa: Associations With Causative Genes in a Large Cohort.

Testa F et al.

Investigative Ophthalmology & Visual Science, 2025

40900079 (PubMed )
Supplement: iovs-66-12-5_s001.pdf

Frequency enrichment of coding variants in a French-Canadian founder population and its implication for inflammatory bowel diseases.

Bhérer C et al.

Medrxiv : the Preprint Server for Health Sciences, 2025

40791678 (PubMed )
Supplement: media-2.xlsx › Table_S12_ClinVar_PLP_variants

Cochlear Implantation Outcomes in Genotyped Subjects with Sensorineural Hearing Loss.

Fehrmann MLA et al.

Journal of the Association for Research in Otolaryngology : Jaro, 2025

The value of age of onset and family history as predictors of molecular diagnosis in a Swedish cohort of inherited retinal disease.

De Geer K et al.

Acta Ophthalmologica, 2025

39643591 (PubMed )
Supplement: AOS-103-327-s002.xlsx › cohort_data

Current approaches for Usher syndrome disease models and developing therapies.

Leith FK et al.

Frontiers in Cell and Developmental Biology, 2025

Screening of Inherited Retinal Disease Patients in a Low-Resource Setting Using an Augmented Next-Generation Sequencing Panel.

Midgley N et al.

Molecular Genetics & Genomic Medicine, 2024

A Comparative Evaluation of the Genetic Variant Spectrum in the USH2A Gene in Russian Patients with Isolated and Syndromic Forms of Retinitis Pigmentosa.

Ogorodova N et al.

International Journal of Molecular Sciences, 2024

39596236 (PubMed )
Supplement: ijms-25-12169-s001.zip › suppl_mat.xlsx › Table_S3

Frequency and Genetic Spectrum of Inherited Retinal Dystrophies in a Large Dutch Pediatric Cohort: The RD5000 Consortium.

Heutinck PAT et al.

Investigative Ophthalmology & Visual Science, 2024

39189993 (PubMed )
Supplement: iovs-65-10-40_s001.xlsx › Sheet1

Rod and Cone Function Measured Objectively by Chromatic Pupil Campimetry Show a Different Preservation Between Distinct Genotypes in Retinitis Pigmentosa.

Kelbsch C et al.

Investigative Ophthalmology & Visual Science, 2023

37578425 (PubMed )
Supplement: iovs-64-11-18_s001.pdf

Association of Genetic Diagnoses for Childhood-Onset Hearing Loss With Cochlear Implant Outcomes.

Carlson RJ et al.

Jama Otolaryngology-- Head & Neck Surgery, 2023

Cost-effective sequence analysis of 113 genes in 1,192 probands with retinitis pigmentosa and Leber congenital amaurosis.

Panneman DM et al.

Frontiers in Cell and Developmental Biology, 2023

36819107 (PubMed )
Supplement: Table4.xlsx › Results

Transposable element insertions in 1000 Swedish individuals.

Bilgrav Saether K et al.

Plos One, 2023

37506127 (PubMed )
Supplement: pone.0289346.s002.xlsx › Table_8

Genetic epidemiology of inherited retinal diseases in a large patient cohort followed at a single center in Italy.

Karali M et al.

Scientific Reports, 2022

36460718 (PubMed )
Supplement: 41598_2022_24636_MOESM2_ESM.xlsx › Supplementary_Table_S1

Assessing the Pathogenicity of In-Frame CACNA1F Indel Variants Using Structural Modeling.

Sallah SR et al.

The Journal of Molecular Diagnostics : Jmd, 2022

36191840 (PubMed )
Supplement: mmc4.docx

A Comprehensive Evaluation of the Performance of Prediction Algorithms on Clinically Relevant Missense Variants.

Qorri E et al.

International Journal of Molecular Sciences, 2022

35887294 (PubMed )
Supplement: ijms-23-07946-s001.zip › Supplementary_Table_S7.xlsx › Circularity_Dataset__CircD_

The Study of a 231 French Patient Cohort Significantly Extends the Mutational Spectrum of the Two Major Usher Genes MYO7A and USH2A.

Mansard L et al.

International Journal of Molecular Sciences, 2021

Panel-based genetic testing for inherited retinal disease screening 176 genes.

Sheck LHN et al.

Molecular Genetics & Genomic Medicine, 2021

33749171 (PubMed )
Supplement: MGG3-9-e1663-s001.xlsx › new

VIP-HL: Semi-automated ACMG/AMP variant interpretation platform for genetic hearing loss.

Peng J et al.

Human Mutation, 2021

Molecular Inversion Probe-Based Sequencing of USH2A Exons and Splice Sites as a Cost-Effective Screening Tool in USH2 and arRP Cases.

Reurink J et al.

International Journal of Molecular Sciences, 2021

Generation and Genetic Correction of USH2A c.2299delG Mutation in Patient-Derived Induced Pluripotent Stem Cells.

Liu X et al.

Genes, 2021

A novel statistical method for interpreting the pathogenicity of rare variants.

Wang J et al.

Genetics in Medicine : Official Journal of the American College of Medical Genetics, 2021

32884132 (PubMed )
Supplement: NIHMS1630822-supplement-Supplementary_Tables.xlsx › S8_USH2A_variants

USH2A is a Meissner's corpuscle protein necessary for normal vibration sensing in mice and humans.

Schwaller F et al.

Nature Neuroscience, 2021

Generation of three induced pluripotent stem cell lines from a patient with Usher syndrome caused by biallelic c.949C > A and c.1256G > T mutations in the USH2A gene.

Zaw K et al.

Stem Cell Research, 2021

Management of Full-Thickness Macular Hole in A Genetically Confirmed Case with Usher Syndrome.

Panagiotou ES et al.

Ophthalmology and Therapy, 2020

Clinical and Genetic Analysis of a European Cohort with Pericentral Retinitis Pigmentosa.

Karali M et al.

International Journal of Molecular Sciences, 2019

Generation of two induced pluripotent stem cell lines from a patient with compound heterozygous mutations in the USH2A gene.

McLenachan S et al.

Stem Cell Research, 2019

Assessing the Pathogenicity, Penetrance, and Expressivity of Putative Disease-Causing Variants in a Population Setting.

Wright CF et al.

American Journal of Human Genetics, 2019

30665703 (PubMed )
Supplement: mmc3.xlsx › data_for_supp2

High-throughput sequencing for the molecular diagnosis of Usher syndrome reveals 42 novel mutations and consolidates CEP250 as Usher-like disease causative.

Fuster-García C et al.

Scientific Reports, 2018

Next-generation sequencing reveals the mutational landscape of clinically diagnosed Usher syndrome: copy number variations, phenocopies, a predominant target for translational read-through, and PEX26 mutated in Heimler syndrome.

Neuhaus C et al.

Molecular Genetics & Genomic Medicine, 2017

Molecular findings from 537 individuals with inherited retinal disease.

Ellingford JM et al.

Journal of Medical Genetics, 2016

27208204 (PubMed )
Supplement: jmedgenet-2016-103837supp_tables.pdf

A combination of two truncating mutations in USH2A causes more severe and progressive hearing impairment in Usher syndrome type IIa.

Hartel BP et al.

Hearing Research, 2016

Usher syndrome in Denmark: mutation spectrum and some clinical observations.

Dad S et al.

Molecular Genetics & Genomic Medicine, 2016

Usher syndrome: an effective sequencing approach to establish a genetic and clinical diagnosis.

Lenarduzzi S et al.

Hearing Research, 2015

The efficacy of microarray screening for autosomal recessive retinitis pigmentosa in routine clinical practice.

van Huet RA et al.

Molecular Vision, 2015

MutPred Splice: machine learning-based prediction of exonic variants that disrupt splicing.

Mort M et al.

Genome Biology, 2014

24451234 (PubMed )
Supplement: gb-2014-15-1-r19-S1.pdf

Experience of targeted Usher exome sequencing as a clinical test.

Besnard T et al.

Molecular Genetics & Genomic Medicine, 2014

Alternative splicing and retinal degeneration.

Liu MM et al.

Clinical Genetics, 2013

Complete exon sequencing of all known Usher syndrome genes greatly improves molecular diagnosis.

Bonnet C et al.

Orphanet Journal of Rare Diseases, 2011

Nasal epithelial cells are a reliable source to study splicing variants in Usher syndrome.

Vaché C et al.

Human Mutation, 2010

Spectrum of USH2A mutations in Scandinavian patients with Usher syndrome type II.

Dreyer B et al.

Human Mutation, 2008

USH2A mutation analysis in 70 Dutch families with Usher syndrome type II.

Pennings RJ et al.

Human Mutation, 2004

Identification of 51 novel exons of the Usher syndrome type 2A (USH2A) gene that encode multiple conserved functional domains and that are mutated in patients with Usher syndrome type II.

van Wijk E et al.

American Journal of Human Genetics, 2004

Pathogenesis and Treatment of Usher Syndrome Type IIA.

Zaw K et al.

Asia-pacific Journal of Ophthalmology (philadelphia, Pa.), 0

Variability in Cochlear Implantation Outcomes in a Large German Cohort With a Genetic Etiology of Hearing Loss.

Tropitzsch A et al.

Ear and Hearing, 0

37438890 (PubMed )
Supplement: aud-44-1464-s001.pdf
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."