Varaico: Literature-Extracted Genetic Variants

ALMS1

603 papers

RefSeq Summary

This gene encodes a protein containing a large tandem-repeat domain as well as additional low complexity regions. The encoded protein functions in microtubule organization, particularly in the formati...

Pfam Domains

ALMS_repeataa 539–585UCSCAlstrom syndrome repeat

ALMS_repeataa 586–632UCSCAlstrom syndrome repeat

ALMS_repeataa 633–679UCSCAlstrom syndrome repeat

ALMS_repeataa 680–726UCSCAlstrom syndrome repeat

ALMS_repeataa 727–774UCSCAlstrom syndrome repeat

ALMS_repeataa 775–821UCSCAlstrom syndrome repeat

Gene Aliases

HGNC Name

ALMS1 centrosome and basal body associated protein

HGNC Alias Symbol

KIAA0328

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001378454.1

p.Y410fs

c.1228_1229fs

Surrounding Variants

1 paper

NM_001378454.1

p.Y410_L411delFs

c.1230_1233del4

1 paper

NM_001378454.1

p.T409delFs

c.1227delA

1 paper

NM_001378454.1

p.Y410delFs

c.1229_1230delAT

1 paper

NM_015120.4

p.T410_Y411delFs

c.1230_1233del4

1 paper

NM_001378454.1

p.E408*

c.1222G>T

1 paper

NM_001378454.1

p.K413Splc

c.1237+1G>C

1 paper

NM_001378454.1

p.S404C

c.1211C>G

1 paper

NM_015120.4

p.S404*

c.1211C>A

1 paper

NM_015120.4

p.S404*

c.1211C>G

1 paper

NM_001378454.1

p.Q400fs

c.1198_1199fs

4 papers

NM_001378454.1

p.Q400_D402delFs

c.1199_1205del7

2 papers

NM_001378454.1

p.T399fs

c.1195_1196fs