Varaico: Literature-Extracted Genetic Variants

ATR

1,915 papers

RefSeq Summary

The protein encoded by this gene is a serine/threonine kinase and DNA damage sensor, activating cell cycle checkpoint signaling upon DNA stress. The encoded protein can phosphorylate and activate seve...

Pfam Domains

N-HEAT_ATRaa 5–551UCSCSerine/threonine-protein kinase ATR, N-HEAT region

UMEaa 1122–1223UCSCUME (NUC010) domain

M-HEAT_ATRaa 1474–1709UCSCSerine/threonine-protein kinase ATR, M-HEAT region

FATaa 1771–2092UCSCFAT domain

HEAT_ATRaa 2121–2219UCSCSerine/threonine-protein kinase ATR-like, HEAT repeats

PI3_PI4_kinaseaa 2322–2567UCSCPhosphatidylinositol 3- and 4-kinase

Gene Aliases

HGNC Name

ATR checkpoint kinase

HGNC Alias Symbols

FRP1; SCKL; SCKL1; MEC1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001184.4

p.V2423fs

c.7267_7268fs

Surrounding Variants

1 paper

NM_001184.4

p.F2424C

c.7271T>G

1 paper

NM_001184.4

p.K2422_V2423insFs

c.7266_7267insA

6 papers

NM_001184.4

p.R2425*

c.7273C>T

26 papers

NM_001184.4

p.R2425Q

c.7274G>A

1 paper

NM_001184.4

p.K2420delFs

c.7260delT

1 paper

NM_001184.4

p.K2420fs

c.7258_7259fs

1 paper

NM_001184.4

p.F2427L

c.7279T>C

1 paper

NM_001184.4

p.F2427L

c.7281T>G

1 paper

NM_001184.4

p.F2427L

c.7281T>A

1 paper

NM_001184.4

p.L2428I

c.7282C>A

1 paper

NM_001184.4

p.E2419K

c.7255G>A

1 paper

NM_001184.4

p.L2417S

c.7250T>C