Varaico: Literature-Extracted Genetic Variants

ATR

1,915 papers

RefSeq Summary

The protein encoded by this gene is a serine/threonine kinase and DNA damage sensor, activating cell cycle checkpoint signaling upon DNA stress. The encoded protein can phosphorylate and activate seve...

Pfam Domains

N-HEAT_ATRaa 5–551UCSCSerine/threonine-protein kinase ATR, N-HEAT region

UMEaa 1122–1223UCSCUME (NUC010) domain

M-HEAT_ATRaa 1474–1709UCSCSerine/threonine-protein kinase ATR, M-HEAT region

FATaa 1771–2092UCSCFAT domain

HEAT_ATRaa 2121–2219UCSCSerine/threonine-protein kinase ATR-like, HEAT repeats

PI3_PI4_kinaseaa 2322–2567UCSCPhosphatidylinositol 3- and 4-kinase

Gene Aliases

HGNC Name

ATR checkpoint kinase

HGNC Alias Symbols

FRP1; SCKL; SCKL1; MEC1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001184.4

p.L341F

c.1023G>T

Surrounding Variants

1 paper

NM_001184.4

p.L341F

c.1023G>C

2 papers

NM_001184.4

p.L342L

c.1024C>T

2 papers

NM_001184.4

p.L341M

c.1021T>A

1 paper

NM_001184.4

p.L342Q

c.1025T>A

1 paper

NM_001184.4

p.K343*

c.1027A>T

1 paper

NM_001184.4

p.D340V

c.1019A>T

2 papers

NM_001184.4

p.D340Y

c.1018G>T

2 papers

NM_001184.4

p.D340H

c.1018G>C

1 paper

NM_001184.4

p.D340N

c.1018G>A

2 papers

NM_001184.4

p.S339_D340delins

c.1017_1018delinsCT

1 paper

NM_001184.4

p.A344T

c.1030G>A

1 paper

NM_001184.4

p.A344V

c.1031C>T