Varaico: Literature-Extracted Genetic Variants

ATRN

100 papers

RefSeq Summary

This gene encodes both membrane-bound and secreted protein isoforms. A membrane-bound isoform exhibits sequence similarity with the mouse mahogany protein, a receptor involved in controlling obesity. ...

Pfam Domains

CUBaa 132–245UCSCCUB domain

EGF_Teneurinaa 250–285UCSCTeneurin-like EGF domain

Beta-prop_ATRN-LZTR1aa 353–641UCSCAttractin/LZTR1 beta-propeller

PSIaa 932–983UCSCPlexin repeat

PSIaa 986–1034UCSCPlexin repeat

EGF_LMN_ATRNaa 1063–1106UCSCLaminin/attractin EGF domain

Gene Aliases

HGNC Name

attractin

HGNC Alias Symbols

DPPT-L; MGCA

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_139321.3

p.L49L

c.147C>T

Surrounding Variants

1 paper

NM_139321.3

p.A45_G46Fs

c.134_136delinsCCFs

1 paper

NM_139321.3

p.P55ins4

c.163_164ins12

1 paper

NM_139321.3

p.L57M

c.169C>A

1 paper

NM_139321.3

p.P59insFs

c.175_176ins5

1 paper

NM_139321.3

p.P59ins4

c.175_176ins12

1 paper

NM_139321.3

p.R40G

c.118A>G

1 paper

NM_139321.3

p.L67del1

c.199_200delTTG

1 paper

NM_139321.3

p.H30P

c.89A>C

1 paper

NM_139321.3

p.L77_P78del1

c.230_232delTGC

1 paper

NM_139321.3

p.A81G

c.242C>G

1 paper

NM_139321.3

p.A81V

c.242C>T

1 paper

NM_139321.3

p.A18T

c.52G>A