Varaico: Literature-Extracted Genetic Variants

ATRN

100 papers

RefSeq Summary

This gene encodes both membrane-bound and secreted protein isoforms. A membrane-bound isoform exhibits sequence similarity with the mouse mahogany protein, a receptor involved in controlling obesity. ...

Pfam Domains

CUBaa 132–245UCSCCUB domain

EGF_Teneurinaa 250–285UCSCTeneurin-like EGF domain

Beta-prop_ATRN-LZTR1aa 353–641UCSCAttractin/LZTR1 beta-propeller

PSIaa 932–983UCSCPlexin repeat

PSIaa 986–1034UCSCPlexin repeat

EGF_LMN_ATRNaa 1063–1106UCSCLaminin/attractin EGF domain

Gene Aliases

HGNC Name

attractin

HGNC Alias Symbols

DPPT-L; MGCA

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_139321.3

p.E127fs

c.379_380fs

Surrounding Variants

1 paper

NM_139321.3

p.V125fs

c.373_374fs

2 papers

NM_139321.3

p.V125insFs

c.374dupT

1 paper

NM_139321.3

p.N112T

c.335A>C

1 paper

NM_139321.3

p.G108fs

c.322_323fs

1 paper

NM_139321.3

p.D102E

c.306C>G

1 paper

NM_139321.3

p.A96S

c.286G>T

1 paper

NM_139321.3

p.S91insFs

c.271_272ins5

1 paper

NM_139321.3

p.S91insFs

c.271_272ins25

2 papers

NM_139321.3

p.A89V

c.266C>T

1 paper

NM_139321.3

p.A89del1

c.265_266delGCG

1 paper

NM_139321.3

p.A83insFs

c.247_248ins5

1 paper

NM_139321.3

p.A83insFs

c.247_248ins25