Varaico: Literature-Extracted Genetic Variants

ATRN

100 papers

RefSeq Summary

This gene encodes both membrane-bound and secreted protein isoforms. A membrane-bound isoform exhibits sequence similarity with the mouse mahogany protein, a receptor involved in controlling obesity. ...

Pfam Domains

CUBaa 132–245UCSCCUB domain

EGF_Teneurinaa 250–285UCSCTeneurin-like EGF domain

Beta-prop_ATRN-LZTR1aa 353–641UCSCAttractin/LZTR1 beta-propeller

PSIaa 932–983UCSCPlexin repeat

PSIaa 986–1034UCSCPlexin repeat

EGF_LMN_ATRNaa 1063–1106UCSCLaminin/attractin EGF domain

Gene Aliases

HGNC Name

attractin

HGNC Alias Symbols

DPPT-L; MGCA

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_139321.3

p.Y535F

c.1604A>T

Surrounding Variants

1 paper

NM_139321.3

p.W544Splc

c.1631+1G>T

1 paper

NM_139321.3

p.S505C

c.1513A>T

1 paper

NM_139321.3

p.W544Splc

c.1632-2A>G

1 paper

NM_139321.3

p.A583T

c.1747G>A

1 paper

NM_139321.3

p.D594N

c.1780G>A

1 paper

NM_139321.3

p.D594_I595ins4

c.1780_1784ins12

1 paper

NM_139321.3

p.D481Y

c.1441G>T

1 paper

NM_139321.3

p.R458Q

c.1373G>A

1 paper

NM_139321.3

p.T453S

c.1357A>T

3 papers

NM_139321.3

p.I426T

c.1277T>C

1 paper

NM_139321.3

p.D611Y

c.1831G>T

1 paper

NM_139321.3

p.H617R

c.1850A>G