Varaico: Literature-Extracted Genetic Variants

ATRN

100 papers

RefSeq Summary

This gene encodes both membrane-bound and secreted protein isoforms. A membrane-bound isoform exhibits sequence similarity with the mouse mahogany protein, a receptor involved in controlling obesity. ...

Pfam Domains

CUBaa 132–245UCSCCUB domain

EGF_Teneurinaa 250–285UCSCTeneurin-like EGF domain

Beta-prop_ATRN-LZTR1aa 353–641UCSCAttractin/LZTR1 beta-propeller

PSIaa 932–983UCSCPlexin repeat

PSIaa 986–1034UCSCPlexin repeat

EGF_LMN_ATRNaa 1063–1106UCSCLaminin/attractin EGF domain

Gene Aliases

HGNC Name

attractin

HGNC Alias Symbols

DPPT-L; MGCA

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_139321.3

p.M848_S849Splc

c.2545-2A>C

Surrounding Variants

1 paper

NM_139321.3

p.S849F

c.2546C>T

1 paper

NM_139321.3

p.S865Y

c.2594C>A

1 paper

NM_139321.3

p.N877D

c.2629A>G

1 paper

NM_139321.3

p.A907T

c.2719G>A

1 paper

NM_139321.3

p.P921delFs

c.2761delC

1 paper

NM_139321.3

p.T943_S944insGTA

c.2827_2831ins9

2 papers

NM_139321.3

p.M950I

c.2850G>A

2 papers

NM_139321.3

p.M950I

c.2850G>C

2 papers

NM_139321.3

p.M950I

c.2850G>T

1 paper

NM_139321.3

p.C952Y

c.2855G>A

1 paper

NM_139321.3

p.N986fs

c.2956_2957fs

1 paper

NM_139321.3

p.N986_L997delFs

c.2957_2991del35