Varaico: Literature-Extracted Genetic Variants

ATRN

100 papers

RefSeq Summary

This gene encodes both membrane-bound and secreted protein isoforms. A membrane-bound isoform exhibits sequence similarity with the mouse mahogany protein, a receptor involved in controlling obesity. ...

Pfam Domains

CUBaa 132–245UCSCCUB domain

EGF_Teneurinaa 250–285UCSCTeneurin-like EGF domain

Beta-prop_ATRN-LZTR1aa 353–641UCSCAttractin/LZTR1 beta-propeller

PSIaa 932–983UCSCPlexin repeat

PSIaa 986–1034UCSCPlexin repeat

EGF_LMN_ATRNaa 1063–1106UCSCLaminin/attractin EGF domain

Gene Aliases

HGNC Name

attractin

HGNC Alias Symbols

DPPT-L; MGCA

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001207047.3

p.L1023Splc

c.3068+5G>A

Surrounding Variants

1 paper

NM_139321.3

p.N1119I

c.3356A>T

1 paper

NM_139321.3

p.Y1146N

c.3436T>A

3 papers

NM_139321.3

p.R1152K

c.3455G>A

1 paper

NM_139321.3

p.R1175H

c.3524G>A

1 paper

NM_139321.3

p.G1067S

c.3199G>A

1 paper

NM_139321.3

p.T1185N

c.3554C>A

1 paper

NM_139321.3

p.S1214L

c.3641C>T

2 papers

NM_139321.3

p.V1226I

c.3676G>A

1 paper

NM_139321.3

p.E1233K

c.3697G>A

1 paper

NM_139321.3

p.I1264N

c.3791T>A

1 paper

NM_139321.3

p.F1036V

c.3106T>G

1 paper

NM_139321.3

p.E1018*

c.3052G>T