Varaico: Literature-Extracted Genetic Variants

ATRX

1,756 papers

RefSeq Summary

The protein encoded by this gene contains an ATPase/helicase domain, and thus it belongs to the SWI/SNF family of chromatin remodeling proteins. This protein is found to undergo cell cycle-dependent p...

Pfam Domains

ADD_ATRXaa 158–213UCSCCysteine Rich ADD domain

SNF2-rel_domaa 1563–1888UCSCSNF2-related domain

Helicase_Caa 2018–2155UCSCHelicase conserved C-terminal domain

ATRX_Caa 2316–2416UCSCATRX C-terminal domain

Gene Aliases

HGNC Name

ATRX chromatin remodeler

HGNC Previous Symbols

RAD54; JMS; MRX52

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_000489.6

p.E30A

c.89A>C

Surrounding Variants

1 paper

NM_000489.6

p.S26_E30delFs

c.76_88del13

2 papers

NM_000489.6

p.E30*

c.88G>T

2 papers

NM_000489.6

p.S29F

c.86C>T

2 papers

NM_000489.6

p.S29Y

c.86C>A

3 papers

NM_000489.6

p.E28D

c.84A>T

2 papers

NM_000489.6

p.E28E

c.84A>G

2 papers

NM_000489.6

p.E28D

c.84A>C

3 papers

NM_000489.6

p.E28V

c.83A>T

1 paper

NM_000489.6

p.E28*

c.82G>T

1 paper

NM_000489.6

p.H24_E27delFs

c.71_81del11

1 paper

NM_000489.6

p.S33C

c.97A>T

1 paper

NM_000489.6

p.S33G

c.97A>G