Varaico: Literature-Extracted Genetic Variants

BRCA1

8,702 papers

RefSeq Summary

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of ...

Pfam Domains

zf-RING_UBOXaa 24–52UCSCRING-type zinc-finger

zf-C3HC4aa 24–64UCSCZinc finger, C3HC4 type (RING finger)

BRCT_assocaa 345–508UCSCSerine-rich domain associated with BRCT

BRCTaa 1642–1723UCSCBRCA1 C Terminus (BRCT) domain

BRCTaa 1756–1842UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

BRCA1 DNA repair associated

HGNC Alias Symbols

RNF53; BRCC1; PPP1R53; FANCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_007294.4

p.E1214G

c.3641A>G

Surrounding Variants

1 paper

NM_007294.4

p.E1213_E1214Fs

c.3637_3641delinsAAGGFs

36 papers

NM_007294.4

p.E1214*

c.3640G>T

5 papers

NM_007294.4

p.E1214D

c.3642G>T

2 papers

NM_007294.4

p.E1214fs

c.3640_3641fs

4 papers

NM_007294.4

p.E1214D

c.3642G>C

1 paper

NM_007294.4

p.E1214Q

c.3640G>C

43 papers

NM_007294.4

p.E1214K

c.3640G>A

1 paper

NM_007294.4

p.E1213delFs

c.3639delT

5 papers

NM_007294.4

p.N1215fs

c.3643_3644fs

2 papers

NM_007294.4

p.N1215Y

c.3643A>T

1 paper

NM_007294.4

p.N1215D

c.3643A>G

1 paper

NM_007294.4

p.E1214delFs

c.3642delC