Varaico: Literature-Extracted Genetic Variants

BRCA1

8,702 papers

RefSeq Summary

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of ...

Pfam Domains

zf-RING_UBOXaa 24–52UCSCRING-type zinc-finger

zf-C3HC4aa 24–64UCSCZinc finger, C3HC4 type (RING finger)

BRCT_assocaa 345–508UCSCSerine-rich domain associated with BRCT

BRCTaa 1642–1723UCSCBRCA1 C Terminus (BRCT) domain

BRCTaa 1756–1842UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

BRCA1 DNA repair associated

HGNC Alias Symbols

RNF53; BRCC1; PPP1R53; FANCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_007294.4

p.N1030_V1035del6

c.3088_3104del18

Surrounding Variants

5 papers

NM_007294.4

p.F1036L

c.3106T>C

3 papers

NM_007294.4

p.F1036fs

c.3106_3107fs

1 paper

NM_007294.4

p.F1036C

c.3107T>G

1 paper

NM_007294.4

p.F1036fs

c.3106_3107fs

4 papers

NM_007294.4

p.F1036L

c.3108T>G

2 papers

NM_007294.4

p.V1035A

c.3104T>C

4 papers

NM_007294.4

p.F1036L

c.3108T>A

1 paper

NM_007294.4

p.V1035D

c.3104T>A

1 paper

NM_007294.4

p.N1034_F1036delFs

c.3100_3107del8

1 paper

NM_007294.4

p.R1032_V1035delFs

c.3096_3103del8

2 papers

NM_007294.4

p.V1035F

c.3103G>T

1 paper

NM_007294.4

p.N1034insFs

c.3102dupT