Varaico: Literature-Extracted Genetic Variants

BRCA1

8,702 papers

RefSeq Summary

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of ...

Pfam Domains

zf-RING_UBOXaa 24–52UCSCRING-type zinc-finger

zf-C3HC4aa 24–64UCSCZinc finger, C3HC4 type (RING finger)

BRCT_assocaa 345–508UCSCSerine-rich domain associated with BRCT

BRCTaa 1642–1723UCSCBRCA1 C Terminus (BRCT) domain

BRCTaa 1756–1842UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

BRCA1 DNA repair associated

HGNC Alias Symbols

RNF53; BRCC1; PPP1R53; FANCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

10 papers

NM_007294.4

p.T922R

c.2765C>G

Surrounding Variants

5 papers

NM_007294.4

p.T922I

c.2765C>T

1 paper

NM_007294.4

p.N909_Q921del13

c.2725_2762del39

2 papers

NM_007294.4

p.T922A

c.2764A>G

1 paper

NM_007294.4

p.T922T

c.2766A>C

2 papers

NM_007294.4

p.T922fs

c.2764_2765fs

1 paper

NM_007294.4

p.T922_V923insA

c.2764_2768ins3

4 papers

NM_007294.4

p.T922fs

c.2764_2765fs

7 papers

NM_007294.4

p.V923fs

c.2767_2768fs

1 paper

NM_007294.4

p.Q921H

c.2763G>T

2 papers

NM_007294.4

p.Q921fs

c.2761_2762fs

1 paper

NM_007294.4

p.Q921H

c.2763G>C

2 papers

NM_007294.4

p.Q921Q

c.2763G>A