Varaico: Literature-Extracted Genetic Variants

BRCA1

8,702 papers

RefSeq Summary

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of ...

Pfam Domains

zf-RING_UBOXaa 24–52UCSCRING-type zinc-finger

zf-C3HC4aa 24–64UCSCZinc finger, C3HC4 type (RING finger)

BRCT_assocaa 345–508UCSCSerine-rich domain associated with BRCT

BRCTaa 1642–1723UCSCBRCA1 C Terminus (BRCT) domain

BRCTaa 1756–1842UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

BRCA1 DNA repair associated

HGNC Alias Symbols

RNF53; BRCC1; PPP1R53; FANCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_007294.4

p.V419fs

c.1255_1256fs

Surrounding Variants

2 papers

NM_007294.4

p.V419V

c.1257A>T

2 papers

NM_007294.4

p.V419insFs

c.1256dupT

1 paper

NM_007294.4

p.V419insFs

c.1256_1257insGG

5 papers

NM_007294.4

p.V419G

c.1256T>G

3 papers

NM_007294.4

p.V419delFs

c.1255delC

1 paper

NM_007294.4

p.L416_V419delFs

c.1246_1255del10

1 paper

NM_007294.4

p.D420fs

c.1258_1259fs

20 papers

NM_007294.4

p.D420Y

c.1258G>T

1 paper

NM_007294.4

p.D420insFs

c.1258_1259ins5

2 papers

NM_007294.4

p.D420N

c.1258G>A

5 papers

NM_007294.4

p.V419delFs

c.1257delT

1 paper

NM_007294.4

p.D414_V419delFs

c.1242_1257del16