Varaico: Literature-Extracted Genetic Variants

BRCA1

8,702 papers

RefSeq Summary

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of ...

Pfam Domains

zf-RING_UBOXaa 24–52UCSCRING-type zinc-finger

zf-C3HC4aa 24–64UCSCZinc finger, C3HC4 type (RING finger)

BRCT_assocaa 345–508UCSCSerine-rich domain associated with BRCT

BRCTaa 1642–1723UCSCBRCA1 C Terminus (BRCT) domain

BRCTaa 1756–1842UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

BRCA1 DNA repair associated

HGNC Alias Symbols

RNF53; BRCC1; PPP1R53; FANCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

5 papers

NM_007294.4

p.K110delFs

c.329delT

Surrounding Variants

2 papers

NM_007294.4

p.K110N

c.330G>T

4 papers

NM_007294.4

p.K110fs

c.328_329fs

29 papers

NM_007294.4

p.K110insFs

c.329_330insA

2 papers

NM_007294.4

p.K110N

c.330G>C

1 paper

NM_007294.4

p.K110delFs

c.328_329delTT

1 paper

NM_007294.4

p.K109_K110del1

c.327_329delTTT

1 paper

NM_007294.4

p.A108_K110del0

c.324_329del6

1 paper

NM_007294.4

p.N106_K109del4

c.316_326del12

1 paper

NM_007294.4

p.N103_K109del7

c.307_326del21

7 papers

NM_007294.4

p.E111*

c.331G>T

1 paper

NM_007294.4

p.E111Q

c.331G>C

14 papers

NM_007294.4

p.E111K

c.331G>A