Varaico: Literature-Extracted Genetic Variants

BRCA1

8,702 papers

RefSeq Summary

This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of ...

Pfam Domains

zf-RING_UBOXaa 24–52UCSCRING-type zinc-finger

zf-C3HC4aa 24–64UCSCZinc finger, C3HC4 type (RING finger)

BRCT_assocaa 345–508UCSCSerine-rich domain associated with BRCT

BRCTaa 1642–1723UCSCBRCA1 C Terminus (BRCT) domain

BRCTaa 1756–1842UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

BRCA1 DNA repair associated

HGNC Alias Symbols

RNF53; BRCC1; PPP1R53; FANCS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

11 papers

NM_007294.4

p.T37A

c.109A>G

Surrounding Variants

9 papers

NM_007294.4

p.T37S

c.109A>T

7 papers

NM_007294.4

p.T37P

c.109A>C

1 paper

NM_007294.4

p.T37_K38insT

c.109_113ins3

1 paper

NM_007294.4

p.T37insFs

c.109_110ins5

1 paper

NM_007294.4

p.S36delFs

c.108delG

7 papers

NM_007294.4

p.T37I

c.110C>T

2 papers

NM_007294.4

p.S36S

c.108C>T

52 papers

NM_007294.4

p.T37R

c.110C>G

46 papers

NM_007294.4

p.T37K

c.110C>A

1 paper

NM_007294.4

p.S36_T37delFs

c.106_109del4

1 paper

NM_007294.4

p.V35_T37delFs

c.103_109del7

5 papers

NM_007294.4

p.S36F

c.107C>T