Varaico: Literature-Extracted Genetic Variants

CD6

145 papers

RefSeq Summary

This gene encodes a protein found on the outer membrane of T-lymphocytes as well as some other immune cells. The encoded protein contains three scavenger receptor cysteine-rich (SRCR) domains and a bi...

Pfam Domains

SRCRaa 48–156UCSCScavenger receptor cysteine-rich domain

SRCRaa 164–260UCSCScavenger receptor cysteine-rich domain

SRCRaa 268–361UCSCScavenger receptor cysteine-rich domain

Gene Aliases

HGNC Name

CD6 molecule

HGNC Alias Symbol

Tp120

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_006725.5

p.N541S

c.1622A>G

Surrounding Variants

1 paper

NM_006725.5

p.T539A

c.1615A>G

1 paper

NM_006725.5

p.I537F

c.1609A>T

1 paper

NM_006725.5

p.Y556F

c.1667A>T

1 paper

NM_006725.5

p.H557Y

c.1669C>T

1 paper

NM_006725.5

p.S560N

c.1679G>A

1 paper

NM_006725.5

p.G569G

c.1707G>C

1 paper

NM_006725.5

p.Y572F

c.1715A>T

1 paper

NM_006725.5

p.L580_R592delFs

c.1740_1774del35

1 paper

NM_006725.5

p.A605A

c.1815C>T

4 papers

NM_006725.5

p.G606S

c.1816G>A

1 paper

NM_006725.5

p.S624_S625insA

c.1870_1874ins3

2 papers

NM_006725.5

p.Y629F

c.1886A>T