Varaico: Literature-Extracted Genetic Variants

CDH20

107 papers

RefSeq Summary

This gene is a type II classical cadherin from the cadherin superfamily and one of three cadherin 7-like genes located in a cluster on chromosome 18. The encoded membrane protein is a calcium dependen...

Pfam Domains

Cadherinaa 64–156UCSCCadherin domain

Cadherinaa 170–265UCSCCadherin domain

Cadherinaa 279–381UCSCCadherin domain

Cadherinaa 394–485UCSCCadherin domain

Cadherinaa 498–595UCSCCadherin domain

CADH_Y-type_LIRaa 733–792UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 20

HGNC Alias Symbol

CDH7L3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_031891.4

p.L20F

c.60G>T

Surrounding Variants

1 paper

NM_031891.4

p.L20F

c.60G>C

2 papers

NM_031891.4

p.T29M

c.86C>T

1 paper

NM_031891.4

p.V32I

c.94G>A

1 paper

NM_031891.4

p.V32F

c.94G>T

1 paper

NM_031891.4

p.D49E

c.147C>A

1 paper

NM_031891.4

p.D49E

c.147C>G

1 paper

NM_031891.4

p.N64S

c.191A>G

2 papers

NM_031891.4

p.V68I

c.202G>A

1 paper

NM_031891.4

p.G81S

c.241G>A

1 paper

NM_031891.4

p.K82M

c.245A>T

1 paper

NM_031891.4

p.S93F

c.278C>T

1 paper

NM_031891.4

p.I94T

c.281T>C