Varaico: Literature-Extracted Genetic Variants

CDH20

107 papers

RefSeq Summary

This gene is a type II classical cadherin from the cadherin superfamily and one of three cadherin 7-like genes located in a cluster on chromosome 18. The encoded membrane protein is a calcium dependen...

Pfam Domains

Cadherinaa 64–156UCSCCadherin domain

Cadherinaa 170–265UCSCCadherin domain

Cadherinaa 279–381UCSCCadherin domain

Cadherinaa 394–485UCSCCadherin domain

Cadherinaa 498–595UCSCCadherin domain

CADH_Y-type_LIRaa 733–792UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 20

HGNC Alias Symbol

CDH7L3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_031891.4

p.I94T

c.281T>C

Surrounding Variants

1 paper

NM_031891.4

p.S93F

c.278C>T

1 paper

NM_031891.4

p.I97N

c.290T>A

1 paper

NM_031891.4

p.G100E

c.299G>A

1 paper

NM_031891.4

p.A118V

c.353C>T

1 paper

NM_031891.4

p.L122I

c.364C>A

1 paper

NM_031891.4

p.D123N

c.367G>A

1 paper

NM_031891.4

p.D123D

c.369C>T

1 paper

NM_031891.4

p.R124*

c.370C>T

1 paper

NM_031891.4

p.E126K

c.376G>A

1 paper

NM_031891.4

p.R133S

c.399G>C

1 paper

NM_031891.4

p.R133S

c.399G>T

1 paper

NM_031891.4

p.M145K

c.434T>A