Varaico: Literature-Extracted Genetic Variants

CDH20

107 papers

RefSeq Summary

This gene is a type II classical cadherin from the cadherin superfamily and one of three cadherin 7-like genes located in a cluster on chromosome 18. The encoded membrane protein is a calcium dependen...

Pfam Domains

Cadherinaa 64–156UCSCCadherin domain

Cadherinaa 170–265UCSCCadherin domain

Cadherinaa 279–381UCSCCadherin domain

Cadherinaa 394–485UCSCCadherin domain

Cadherinaa 498–595UCSCCadherin domain

CADH_Y-type_LIRaa 733–792UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 20

HGNC Alias Symbol

CDH7L3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_031891.4

p.K310R

c.929A>G

Surrounding Variants

1 paper

NM_031891.4

p.M309I

c.927G>A

1 paper

NM_031891.4

p.M309I

c.927G>C

1 paper

NM_031891.4

p.M309I

c.927G>T

1 paper

NM_031891.4

p.D315G

c.944A>G

1 paper

NM_031891.4

p.A319G

c.956C>G

1 paper

NM_031891.4

p.F322V

c.964T>G

1 paper

NM_031891.4

p.D323N

c.967G>A

1 paper

NM_031891.4

p.V293V

c.879C>T

1 paper

NM_031891.4

p.D327G

c.980A>G

2 papers

NM_031891.4

p.I334V

c.1000A>G

1 paper

NM_031891.4

p.S282N

c.845G>A

1 paper

NM_031891.4

p.K277Splc

c.830-39C>T