Varaico: Literature-Extracted Genetic Variants

CDH20

107 papers

RefSeq Summary

This gene is a type II classical cadherin from the cadherin superfamily and one of three cadherin 7-like genes located in a cluster on chromosome 18. The encoded membrane protein is a calcium dependen...

Pfam Domains

Cadherinaa 64–156UCSCCadherin domain

Cadherinaa 170–265UCSCCadherin domain

Cadherinaa 279–381UCSCCadherin domain

Cadherinaa 394–485UCSCCadherin domain

Cadherinaa 498–595UCSCCadherin domain

CADH_Y-type_LIRaa 733–792UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 20

HGNC Alias Symbol

CDH7L3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_031891.4

p.E668K

c.2002G>A

Surrounding Variants

1 paper

NM_031891.4

p.G669G

c.2007C>A

1 paper

NM_031891.4

p.E676K

c.2026G>A

1 paper

NM_031891.4

p.E656*

c.1966G>T

1 paper

NM_031891.4

p.R687Q

c.2060G>A

1 paper

NM_031891.4

p.E688Q

c.2062G>C

1 paper

NM_031891.4

p.A691fs

c.2071_2072fs

1 paper

NM_031891.4

p.A691V

c.2072C>T

1 paper

NM_031891.4

p.A691delFs

c.2073delG

1 paper

NM_031891.4

p.M642K

c.1925T>A

1 paper

NM_031891.4

p.A694T

c.2080G>A

2 papers

NM_031891.4

p.R698L

c.2093G>T

1 paper

NM_031891.4

p.E704K

c.2110G>A