Varaico: Literature-Extracted Genetic Variants

CDH5

266 papers

RefSeq Summary

This gene encodes a classical cadherin of the cadherin superfamily. The encoded preproprotein is proteolytically processed to generate the mature glycoprotein. This calcium-dependent cell-cell adhesio...

Pfam Domains

Cadherinaa 52–142UCSCCadherin domain

Cadherinaa 156–249UCSCCadherin domain

Cadherinaa 263–364UCSCCadherin domain

Cadherinaa 377–470UCSCCadherin domain

Cadherinaa 483–576UCSCCadherin domain

CADH_Y-type_LIRaa 716–775UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 5

HGNC Alias Symbols

7B4; CD144

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001795.5

p.M5I

c.15G>C

Surrounding Variants

1 paper

NM_001795.5

p.M5I

c.15G>A

1 paper

NM_001795.5

p.M5I

c.15G>T

1 paper

NM_001795.5

p.M6V

c.16A>G

1 paper

NM_001795.5

p.L4I

c.10C>A

1 paper

NM_001795.5

p.M1R

c.2T>G

1 paper

NM_001795.5

p.M1V

c.1A>G

1 paper

NM_001795.5

p.T10I

c.29C>T

1 paper

NM_001795.5

p.G12C

c.34G>T

4 papers

NM_001795.5

p.G12D

c.35G>A

2 papers

NM_001795.5

p.G12V

c.35G>T

1 paper

NM_001795.5

p.V23M

c.67G>A

1 paper

NM_001795.5

p.A25E

c.74C>A