Varaico: Literature-Extracted Genetic Variants

CDH5

266 papers

RefSeq Summary

This gene encodes a classical cadherin of the cadherin superfamily. The encoded preproprotein is proteolytically processed to generate the mature glycoprotein. This calcium-dependent cell-cell adhesio...

Pfam Domains

Cadherinaa 52–142UCSCCadherin domain

Cadherinaa 156–249UCSCCadherin domain

Cadherinaa 263–364UCSCCadherin domain

Cadherinaa 377–470UCSCCadherin domain

Cadherinaa 483–576UCSCCadherin domain

CADH_Y-type_LIRaa 716–775UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 5

HGNC Alias Symbols

7B4; CD144

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001795.5

p.W51R

c.151T>A

Surrounding Variants

1 paper

NM_001795.5

p.W51R

c.151T>C

1 paper

NM_001795.5

p.I50T

c.149T>C

2 papers

NM_001795.5

p.N52Y

c.154A>T

1 paper

NM_001795.5

p.Q53L

c.158A>T

2 papers

NM_001795.5

p.D48V

c.143A>T

1 paper

NM_001795.5

p.M54K

c.161T>A

1 paper

NM_001795.5

p.R44C

c.130C>T

1 paper

NM_001795.5

p.E59A

c.176A>C

1 paper

NM_001795.5

p.L39delFs

c.115delC

1 paper

NM_001795.5

p.T35T

c.105C>G

1 paper

NM_001795.5

p.G69D

c.206G>A

1 paper

NM_001795.5

p.A25E

c.74C>A