Varaico: Literature-Extracted Genetic Variants

CDH5

266 papers

RefSeq Summary

This gene encodes a classical cadherin of the cadherin superfamily. The encoded preproprotein is proteolytically processed to generate the mature glycoprotein. This calcium-dependent cell-cell adhesio...

Pfam Domains

Cadherinaa 52–142UCSCCadherin domain

Cadherinaa 156–249UCSCCadherin domain

Cadherinaa 263–364UCSCCadherin domain

Cadherinaa 377–470UCSCCadherin domain

Cadherinaa 483–576UCSCCadherin domain

CADH_Y-type_LIRaa 716–775UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 5

HGNC Alias Symbols

7B4; CD144

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001795.5

p.D756H

c.2266G>C

Surrounding Variants

3 papers

NM_001795.5

p.N761K

c.2283C>A

3 papers

NM_001795.5

p.N761K

c.2283C>G

1 paper

NM_001795.5

p.D762N

c.2284G>A

1 paper

NM_001795.5

p.D749A

c.2246A>C

1 paper

NM_001795.5

p.K768R

c.2303A>G

1 paper

NM_001795.5

p.M769V

c.2305A>G

1 paper

NM_001795.5

p.E737K

c.2209G>A

1 paper

NM_001795.5

p.D777A

c.2330A>C

1 paper

NM_001795.5

p.Y733S

c.2198A>C

3 papers

NM_001795.5

p.Y731F

c.2192A>T

1 paper

NM_001795.5

p.H729R

c.2186A>G

1 paper

NM_001795.5

p.D714E

c.2142C>A