Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

5 papers

NM_016279.4

p.T737M

c.2210C>T

Surrounding Variants

1 paper

NM_016279.4

p.S734L

c.2201C>T

1 paper

NM_016279.4

p.S734*

c.2201C>A

1 paper

NM_016279.4

p.D733E

c.2199T>G

1 paper

NM_016279.4

p.D733E

c.2199T>A

1 paper

NM_016279.4

p.E741K

c.2221G>A

1 paper

NM_016279.4

p.D733N

c.2197G>A

1 paper

NM_016279.4

p.G742W

c.2224G>T

1 paper

NM_016279.4

p.D744N

c.2230G>A

1 paper

NM_016279.4

p.P730L

c.2189C>T

1 paper

NM_016279.4

p.D744_S745insFs

c.2232_2233ins5

1 paper

NM_016279.4

p.S745fs

c.2233_2234fs

1 paper

NM_016279.4

p.S745F

c.2234C>T