Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.K642fs

c.1924_1925fs

Surrounding Variants

1 paper

NM_016279.4

p.K642delFs

c.1925delT

1 paper

NM_016279.4

p.E643K

c.1927G>A

1 paper

NM_016279.4

p.I646K

c.1937T>A

2 papers

NM_016279.4

p.D651N

c.1951G>A

1 paper

NM_016279.4

p.L632S

c.1895T>C

1 paper

NM_016279.4

p.Y659H

c.1975T>C

1 paper

NM_016279.4

p.N660S

c.1979A>G

1 paper

NM_016279.4

p.D661N

c.1981G>A

1 paper

NM_016279.4

p.G663R

c.1987G>C

1 paper

NM_016279.4

p.E666K

c.1996G>A

1 paper

NM_016279.4

p.E666D

c.1998A>T

1 paper

NM_016279.4

p.E666D

c.1998A>C