Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.L611V

c.1831C>G

Surrounding Variants

1 paper

NM_016279.4

p.G610D

c.1829G>A

1 paper

NM_016279.4

p.T613M

c.1838C>T

1 paper

NM_016279.4

p.A615T

c.1843G>A

4 papers

NM_016279.4

p.E603G

c.1808A>G

1 paper

NM_016279.4

p.S599F

c.1796C>T

1 paper

NM_016279.4

p.Q598R

c.1793A>G

1 paper

NM_016279.4

p.N596I

c.1787A>T

1 paper

NM_016279.4

p.Q594*

c.1780C>T

2 papers

NM_016279.4

p.D592N

c.1774G>A

1 paper

NM_016279.4

p.R587fs

c.1759_1760fs

2 papers

NM_016279.4

p.R587H

c.1760G>A

1 paper

NM_016279.4

p.R587insFs

c.1759_1760insAT