Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.R558S

c.1672C>A

Surrounding Variants

1 paper

NM_016279.4

p.R558C

c.1672C>T

1 paper

NM_016279.4

p.G555V

c.1664G>T

1 paper

NM_016279.4

p.Y564N

c.1690T>A

1 paper

NM_016279.4

p.P567S

c.1699C>T

1 paper

NM_016279.4

p.P567L

c.1700C>T

1 paper

NM_016279.4

p.P567Q

c.1700C>A

1 paper

NM_016279.4

p.I570M

c.1710C>G

1 paper

NM_016279.4

p.N545D

c.1633A>G

1 paper

NM_016279.4

p.D572E

c.1716C>A

3 papers

NM_016279.4

p.D574N

c.1720G>A

1 paper

NM_016279.4

p.R587insFs

c.1759_1760insAT

2 papers

NM_016279.4

p.R587H

c.1760G>A