Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.T532S

c.1594A>T

Surrounding Variants

1 paper

NM_016279.4

p.T532S

c.1595C>G

1 paper

NM_016279.4

p.L533P

c.1598T>C

1 paper

NM_016279.4

p.E530V

c.1589A>T

1 paper

NM_016279.4

p.P535L

c.1604C>T

1 paper

NM_016279.4

p.H521N

c.1561C>A

1 paper

NM_016279.4

p.K543insFs

c.1627_1628ins5

1 paper

NM_016279.4

p.K543N

c.1629A>T

1 paper

NM_016279.4

p.K543N

c.1629A>C

1 paper

NM_016279.4

p.G520R

c.1558G>C

1 paper

NM_016279.4

p.G520S

c.1558G>A

1 paper

NM_016279.4

p.D515N

c.1543G>A

1 paper

NM_016279.4

p.D513N

c.1537G>A