Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.D132E

c.396C>A

Surrounding Variants

1 paper

NM_016279.4

p.D132E

c.396C>G

1 paper

NM_016279.4

p.D132Y

c.394G>T

1 paper

NM_016279.4

p.D132H

c.394G>C

1 paper

NM_016279.4

p.R133K

c.398G>A

1 paper

NM_016279.4

p.R137W

c.409C>T

1 paper

NM_016279.4

p.R137L

c.410G>T

4 papers

NM_016279.4

p.R127C

c.379C>T

1 paper

NM_016279.4

p.E140K

c.418G>A

1 paper

NM_016279.4

p.S143L

c.428C>T

1 paper

NM_016279.4

p.S143*

c.428C>A

1 paper

NM_016279.4

p.E144K

c.430G>A

1 paper

NM_016279.4

p.K121Q

c.361A>C