Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.K115delFs

c.345delT

Surrounding Variants

1 paper

NM_016279.4

p.K115fs

c.343_344fs

1 paper

NM_016279.4

p.K115R

c.344A>G

2 papers

NM_016279.4

p.K114N

c.342G>T

1 paper

NM_016279.4

p.K114N

c.342G>C

1 paper

NM_016279.4

p.E120K

c.358G>A

1 paper

NM_016279.4

p.H111Y

c.331C>T

1 paper

NM_016279.4

p.K121Q

c.361A>C

1 paper

NM_016279.4

p.D109N

c.325G>A

4 papers

NM_016279.4

p.R127C

c.379C>T

1 paper

NM_016279.4

p.D132Y

c.394G>T

1 paper

NM_016279.4

p.D132H

c.394G>C

1 paper

NM_016279.4

p.D132E

c.396C>G