Varaico: Literature-Extracted Genetic Variants

CDH9

134 papers

RefSeq Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a l...

Pfam Domains

Cadherinaa 59–150UCSCCadherin domain

Cadherinaa 164–259UCSCCadherin domain

Cadherinaa 273–375UCSCCadherin domain

Cadherinaa 388–479UCSCCadherin domain

Cadherinaa 492–589UCSCCadherin domain

CADH_Y-type_LIRaa 723–782UCSCCadherin, Y-type LIR-motif

Gene Aliases

HGNC Name

cadherin 9

HGNC Previous Name

cadherin 9, type 2 (T1-cadherin)

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016279.4

p.R49C

c.145C>T

Surrounding Variants

2 papers

NM_016279.4

p.R49H

c.146G>A

2 papers

NM_016279.4

p.R50C

c.148C>T

1 paper

NM_016279.4

p.R50H

c.149G>A

1 paper

NM_016279.4

p.K52E

c.154A>G

1 paper

NM_016279.4

p.G45S

c.133G>A

2 papers

NM_016279.4

p.R53H

c.158G>A

1 paper

NM_016279.4

p.G54D

c.161G>A

1 paper

NM_016279.4

p.T41K

c.122C>A

1 paper

NM_016279.4

p.Q59*

c.175C>T

1 paper

NM_016279.4

p.Q59L

c.176A>T

2 papers

NM_016279.4

p.A38V

c.113C>T

1 paper

NM_016279.4

p.A38T

c.112G>A