Varaico: Literature-Extracted Genetic Variants

CDON

161 papers

RefSeq Summary

This gene encodes a cell surface receptor that is a member of the immunoglobulin superfamily. The encoded protein contains three fibronectin type III domains and five immunoglobulin-like C2-type domai...

Pfam Domains

Ig_3aa 28–101UCSCImmunoglobulin domain

Ig_3aa 221–294UCSCImmunoglobulin domain

I-setaa 312–397UCSCImmunoglobulin I-set domain

Ig_3aa 404–504UCSCImmunoglobulin domain

fn3aa 584–671UCSCFibronectin type III domain

fn3aa 722–813UCSCFibronectin type III domain

Gene Aliases

HGNC Name

cell adhesion associated, oncogene regulated

HGNC Alias Symbols

ORCAM; CDON1; Ihog

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001378964.1

p.S913G

c.2737A>G

Surrounding Variants

1 paper

NM_001378964.1

p.M919R

c.2756T>G

3 papers

NM_001378964.1

p.M919I

c.2757G>T

3 papers

NM_001378964.1

p.M919I

c.2757G>C

3 papers

NM_001378964.1

p.M919I

c.2757G>A

2 papers

NM_001378964.1

p.C921*

c.2763C>A

6 papers

NM_001378964.1

p.E922*

c.2764G>T

1 paper

NM_001378964.1

p.V925Splc

c.2773+1G>A

1 paper

NM_001378964.1

p.G892S

c.2674G>A

1 paper

NM_001378964.1

p.S885*

c.2654C>A

2 papers

NM_001378964.1

p.G884Splc

c.2650+1G>T

1 paper

NM_001378964.1

p.E883*

c.2647G>T

2 papers

NM_001378964.1

p.S875G

c.2623A>G