Varaico: Literature-Extracted Genetic Variants

CDON

161 papers

RefSeq Summary

This gene encodes a cell surface receptor that is a member of the immunoglobulin superfamily. The encoded protein contains three fibronectin type III domains and five immunoglobulin-like C2-type domai...

Pfam Domains

Ig_3aa 28–101UCSCImmunoglobulin domain

Ig_3aa 221–294UCSCImmunoglobulin domain

I-setaa 312–397UCSCImmunoglobulin I-set domain

Ig_3aa 404–504UCSCImmunoglobulin domain

fn3aa 584–671UCSCFibronectin type III domain

fn3aa 722–813UCSCFibronectin type III domain

Gene Aliases

HGNC Name

cell adhesion associated, oncogene regulated

HGNC Alias Symbols

ORCAM; CDON1; Ihog

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001378964.1

p.Y611N

c.1831T>A

Surrounding Variants

1 paper

NM_001378964.1

p.P607S

c.1819C>T

1 paper

NM_001378964.1

p.R616G

c.1846C>G

2 papers

NM_001378964.1

p.G605V

c.1814G>T

1 paper

NM_001378964.1

p.G601_K602del1

c.1802_1804delTGC

2 papers

NM_001378964.1

p.W598*

c.1794G>A

2 papers

NM_001378964.1

p.W598*

c.1793G>A

1 paper

NM_001378964.1

p.N570Y

c.1708A>T

1 paper

NM_001378964.1

p.P555P

c.1665G>A

1 paper

NM_001378964.1

p.Q536*

c.1606C>T

3 papers

NM_001378964.1

p.A535T

c.1603G>A

1 paper

NM_001378964.1

p.A534T

c.1600G>A

1 paper

NM_001378964.1

p.S636G

c.1906A>G