Varaico: Literature-Extracted Genetic Variants

CNOT1

16q21 (UCSC)OMIM PanelApp GTEx

221 papers

Pfam Domains

CNOT1_1staa 26–227UCSCCCR4-NOT transcription complex subunit 1, N-terminal domain

CNOT1_HEATaa 500–656UCSCCCR4-NOT transcription complex subunit 1 HEAT repeat

CNOT1_TTP_bindaa 813–1004UCSCCCR4-NOT transcription complex subunit 1 TTP binding domain

CNOT1_CAF1_bindaa 1087–1313UCSCCCR4-NOT transcription complex subunit 1 CAF1-binding domain

DUF3819aa 1387–1534UCSCCCR4-Not complex, Not1 subunit, domain of unknown function DUF3819

Gene Aliases

HGNC Name

CCR4-NOT transcription complex subunit 1

HGNC Previous Symbol

NOT1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_016284.5

p.A615V

c.1844C>T

Surrounding Variants

1 paper

NM_016284.5

p.M617I

c.1851G>T

1 paper

NM_016284.5

p.M617I

c.1851G>C

1 paper

NM_016284.5

p.M617I

c.1851G>A

1 paper

NM_016284.5

p.F619L

c.1855T>C

1 paper

NM_016284.5

p.F619L

c.1857T>G

1 paper

NM_016284.5

p.F619L

c.1857T>A

2 papers

NM_016284.5

p.R623W

c.1867C>T

2 papers

NM_016284.5

p.Q642E

c.1924C>G

1 paper

NM_016284.5

p.A659V

c.1976C>T

1 paper

NM_016284.5

p.T602A

c.1804A>G

1 paper

NM_016284.5

p.L601L

c.1803C>T

1 paper

NM_016284.5

p.K596T

c.1787A>C