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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:CTAG1A

CTAG1A

Xq28 (UCSC)OMIM GTEx

6 papers

RefSeq Summary

The protein encoded by this gene is a tumor cell antigen found in various types of cancers, which makes it a good candidate for a cancer vaccine. This gene is also highly expressed in normal ovary and...

Gene Aliases

HGNC Name

cancer/testis antigen 1A

HGNC Alias Symbols

LAGE2A; ESO1

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

chrX:154585397 C>A

NM_139250.2

p.P64Q

c.191C>A

exact variant not in gnomAD8 overlapping SVs

chrX:154586543 A>C

NM_139250.2

p.D141A

c.422A>C

exact variant not in gnomAD9 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."