Varaico: Literature-Extracted Genetic Variants

CTDP1

126 papers

RefSeq Summary

This gene encodes a protein which interacts with the carboxy-terminus of the RAP74 subunit of transcription initiation factor TFIIF, and functions as a phosphatase that processively dephosphorylates t...

Pfam Domains

BSH_Fcp1aa 18–113UCSCFcp1 barrel-sandwich hybrid domain

NIFaa 183–330UCSCNLI interacting factor-like phosphatase

BRCTaa 649–715UCSCBRCA1 C Terminus (BRCT) domain

FCP1_Caa 716–961UCSCFCP1, C-terminal

Gene Aliases

HGNC Name

CTD phosphatase subunit 1

HGNC Alias Symbol

FCP1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_004715.5

p.A106V

c.317C>T

Surrounding Variants

1 paper

NM_004715.5

p.Q133Splc

c.398+5G>A

1 paper

NM_004715.5

p.Q133Splc

c.399-215C>G

1 paper

NM_004715.5

p.Q133Splc

c.399-193A>G

1 paper

NM_004715.5

p.V153L

c.457G>C

1 paper

NM_004715.5

p.V153L

c.457G>T

1 paper

NM_004715.5

p.E158Q

c.472G>C

1 paper

NM_004715.5

p.V161L

c.481G>T

1 paper

NM_004715.5

p.R176*

c.526C>T

1 paper

NM_004715.5

p.R179Q

c.536G>A

1 paper

NM_004715.5

p.D188E

c.564C>A

1 paper

NM_004715.5

p.D188E

c.564C>G

1 paper

NM_004715.5

p.D190E

c.570C>A