Varaico: Literature-Extracted Genetic Variants

CTDP1

126 papers

RefSeq Summary

This gene encodes a protein which interacts with the carboxy-terminus of the RAP74 subunit of transcription initiation factor TFIIF, and functions as a phosphatase that processively dephosphorylates t...

Pfam Domains

BSH_Fcp1aa 18–113UCSCFcp1 barrel-sandwich hybrid domain

NIFaa 183–330UCSCNLI interacting factor-like phosphatase

BRCTaa 649–715UCSCBRCA1 C Terminus (BRCT) domain

FCP1_Caa 716–961UCSCFCP1, C-terminal

Gene Aliases

HGNC Name

CTD phosphatase subunit 1

HGNC Alias Symbol

FCP1

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004715.5

p.S944A

c.2830T>G

Surrounding Variants

1 paper

NM_004715.5

p.E945D

c.2835G>C

1 paper

NM_004715.5

p.E945D

c.2835G>T

1 paper

NM_004715.5

p.E940K

c.2818G>A

1 paper

NM_004715.5

p.E948K

c.2842G>A

4 papers

NM_004715.5

p.D939D

c.2817T>C

1 paper

NM_004715.5

p.E938K

c.2812G>A

1 paper

NM_004715.5

p.A952V

c.2855C>T

1 paper

NM_004715.5

p.E934D

c.2802G>C

1 paper

NM_004715.5

p.E934D

c.2802G>T

1 paper

NM_004715.5

p.E954K

c.2860G>A

1 paper

NM_004715.5

p.R933M

c.2798G>T

1 paper

NM_004715.5

p.N958delFs

c.2872delA