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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:FMO4

FMO4

90 papers

RefSeq Summary

Metabolic N-oxidation of diet-derived amino-trimethylamine (TMA) is mediated by flavin-containing monooxygenase and is subject to an inherited FMO3 polymorphism in man. This results in a small subpopu...

Pfam Domains

FMO-likeaa 2–532UCSCFlavin-binding monooxygenase-like

Gene Aliases

HGNC Name

flavin containing dimethylaniline monoxygenase 4

HGNC Previous Name

flavin containing monooxygenase 4

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

1–12 of 109 variants

7 papers

chr1:171324288 G>A

NM_002022.3

p.E158K

c.472G>A

FMO-like

exact variant not in gnomAD181 overlapping SVs

6 papers

chr1:171319908 C>A

NM_002022.3

p.P28H

c.83C>A

FMO-like

Exome: 0.0% (AC=2, hom=0)Genome: n/a181 overlapping SVs

4 papers

chr1:171323053 A>G

NM_002022.3

p.N61S

c.182A>G

FMO-like

exact variant not in gnomAD181 overlapping SVs

4 papers

chr1:171334551 T>C

NM_002022.3

p.V323A

c.968T>C

FMO-like

Exome: 0.8% (AC=11934, hom=1109)Genome: 7.2% (AC=11012, hom=1342)184 overlapping SVs

4 papers

chr1:171334697 G>A

NM_002022.3

p.G372S

c.1114G>A

FMO-like

Exome: 0.4% (AC=6557, hom=14)Genome: 0.3% (AC=413, hom=2)184 overlapping SVs

3 papers

chr1:171319935 T>C

NM_002022.3

p.I37T

c.110T>C

FMO-like

Exome: 0.0% (AC=22, hom=0)Genome: 0.0% (AC=12, hom=0)181 overlapping SVs

3 papers

chr1:171324274 C>T

NM_002022.3

p.P153L

c.458C>T

FMO-like

Exome: 0.0% (AC=1, hom=0)Genome: n/a181 overlapping SVs

3 papers

chr1:171334598 G>C

NM_002022.3

p.E339Q

c.1015G>C

FMO-like

Exome: 0.0% (AC=589, hom=4)Genome: 0.3% (AC=519, hom=1)184 overlapping SVs

3 papers

chr1:171341474 G>A

NM_002022.3

p.A438T

c.1312G>A

FMO-like

Exome: 0.0% (AC=122, hom=0)Genome: 0.0% (AC=14, hom=0)182 overlapping SVs

2 papers

chr1:171319877 A>T

NM_002022.3

p.I18F

c.52A>T

FMO-like

exact variant not in gnomAD181 overlapping SVs

2 papers

chr1:171319919 G>A

NM_002022.3

p.E32K

c.94G>A

FMO-like

exact variant not in gnomAD181 overlapping SVs

2 papers

chr1:171323069 G>A

NM_002022.3

p.M66I

c.198G>A

FMO-like

Exome: 0.0% (AC=2, hom=0)Genome: n/a181 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."