Varaico: Literature-Extracted Genetic Variants

GATA5

126 papers

RefSeq Summary

The protein encoded by this gene is a transcription factor that contains two GATA-type zinc fingers. The encoded protein is known to bind to hepatocyte nuclear factor-1alpha (HNF-1alpha), and this int...

Pfam Domains

GATA-Naa 1–176UCSCGATA-type transcription activator, N-terminal

GATAaa 189–223UCSCGATA zinc finger

GATAaa 243–277UCSCGATA zinc finger

Gene Aliases

HGNC Name

GATA binding protein 5

HGNC Alias Symbols

bB379O24.1; GATAS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

6 papers

NM_080473.5

p.H274R

c.821A>G

Surrounding Variants

1 paper

NM_080473.5

p.A266V

c.797C>T

6 papers

NM_080473.5

p.A266P

c.796G>C

1 paper

NM_080473.5

p.E261D

c.783G>T

1 paper

NM_080473.5

p.E261D

c.783G>C

1 paper

NM_080473.5

p.E261K

c.781G>A

1 paper

NM_080473.5

p.G260E

c.779G>A

2 papers

NM_080473.5

p.R256W

c.766C>T

1 paper

NM_080473.5

p.R256G

c.766C>G

1 paper

NM_080473.5

p.R255W

c.763C>T

7 papers

NM_080473.5

p.T252P

c.754A>C

1 paper

NM_080473.5

p.N250D

c.748A>G

1 paper

NM_080473.5

p.T248M

c.743C>T