Varaico: Literature-Extracted Genetic Variants

GATA5

126 papers

RefSeq Summary

The protein encoded by this gene is a transcription factor that contains two GATA-type zinc fingers. The encoded protein is known to bind to hepatocyte nuclear factor-1alpha (HNF-1alpha), and this int...

Pfam Domains

GATA-Naa 1–176UCSCGATA-type transcription activator, N-terminal

GATAaa 189–223UCSCGATA zinc finger

GATAaa 243–277UCSCGATA zinc finger

Gene Aliases

HGNC Name

GATA binding protein 5

HGNC Alias Symbols

bB379O24.1; GATAS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

5 papers

NM_080473.5

p.R132G

c.394C>G

Surrounding Variants

1 paper

NM_080473.5

p.S137L

c.410C>T

5 papers

NM_080473.5

p.Y138F

c.413A>T

1 paper

NM_080473.5

p.Q125L

c.374A>T

9 papers

NM_080473.5

p.Y142H

c.424T>C

1 paper

NM_080473.5

p.P143A

c.427C>G

1 paper

NM_080473.5

p.A119E

c.356C>A

1 paper

NM_080473.5

p.A119S

c.355G>T

1 paper

NM_080473.5

p.G110V

c.329G>T

1 paper

NM_080473.5

p.G109R

c.325G>A

1 paper

NM_080473.5

p.G157R

c.469G>C

1 paper

NM_080473.5

p.G157R

c.469G>A

1 paper

NM_080473.5

p.P158S

c.472C>T