Varaico: Literature-Extracted Genetic Variants

GATA5

126 papers

RefSeq Summary

The protein encoded by this gene is a transcription factor that contains two GATA-type zinc fingers. The encoded protein is known to bind to hepatocyte nuclear factor-1alpha (HNF-1alpha), and this int...

Pfam Domains

GATA-Naa 1–176UCSCGATA-type transcription activator, N-terminal

GATAaa 189–223UCSCGATA zinc finger

GATAaa 243–277UCSCGATA zinc finger

Gene Aliases

HGNC Name

GATA binding protein 5

HGNC Alias Symbols

bB379O24.1; GATAS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

5 papers

NM_080473.5

p.T67P

c.199A>C

Surrounding Variants

1 paper

NM_080473.5

p.A65T

c.193G>A

3 papers

NM_080473.5

p.G63A

c.188G>C

1 paper

NM_080473.5

p.S73A

c.217T>G

3 papers

NM_080473.5

p.R61S

c.181C>A

1 paper

NM_080473.5

p.A74D

c.221C>A

1 paper

NM_080473.5

p.G78S

c.232G>A

1 paper

NM_080473.5

p.T91A

c.271A>G

1 paper

NM_080473.5

p.M42_L43insFs

c.126_127insAA

3 papers

NM_080473.5

p.A92S

c.274G>T

1 paper

NM_080473.5

p.S41S

c.123G>A

1 paper

NM_080473.5

p.P40R

c.119C>G

1 paper

NM_080473.5

p.P40insFs

c.119_120insA