Varaico: Literature-Extracted Genetic Variants

GATA5

126 papers

RefSeq Summary

The protein encoded by this gene is a transcription factor that contains two GATA-type zinc fingers. The encoded protein is known to bind to hepatocyte nuclear factor-1alpha (HNF-1alpha), and this int...

Pfam Domains

GATA-Naa 1–176UCSCGATA-type transcription activator, N-terminal

GATAaa 189–223UCSCGATA zinc finger

GATAaa 243–277UCSCGATA zinc finger

Gene Aliases

HGNC Name

GATA binding protein 5

HGNC Alias Symbols

bB379O24.1; GATAS

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_080473.5

p.A14V

c.41C>T

Surrounding Variants

3 papers

NM_080473.5

p.A14P

c.40G>C

1 paper

NM_080473.5

p.A15P

c.43G>C

1 paper

NM_080473.5

p.Q13R

c.38A>G

6 papers

NM_080473.5

p.Y16D

c.46T>G

1 paper

NM_080473.5

p.D18H

c.52G>C

14 papers

NM_080473.5

p.S19W

c.56C>G

1 paper

NM_080473.5

p.A6V

c.17C>T

13 papers

NM_080473.5

p.Q3R

c.8A>G

1 paper

NM_080473.5

p.M1delins

c.3delinsTTTTAGATCCATATTTTAG

1 paper

NM_080473.5

p.M1T

c.2T>C

1 paper

NM_080473.5

p.A28V

c.83C>T

1 paper

NM_080473.5

p.P31P

c.93G>A