Varaico: Literature-Extracted Genetic Variants

Gene:GLI1
Variant:p.R405W

GLI1

409 papers

RefSeq Summary

This gene encodes a member of the Kruppel family of zinc finger proteins. The encoded transcription factor is activated by the sonic hedgehog signal transduction cascade and regulates stem cell prolif...

Pfam Domains

zf-C2H2_15aa 270–299UCSCC2H2 zinc finger
zf-C2H2_15aa 270–299UCSCC2H2 zinc finger
zf-C2H2_15aa 270–299UCSCC2H2 zinc finger
zf-C2H2aa 301–325UCSCZinc finger, C2H2 type
zf-C2H2aa 301–325UCSCZinc finger, C2H2 type
zf-C2H2aa 301–325UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

GLI family zinc finger 1

HGNC Previous Names

glioma-associated oncogene homolog 1 (zinc finger protein); glioma-associated oncogene family zinc finger 1

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_005269.3
p.R405W
c.1213C>T
Surrounding Variants
1 paper
NM_005269.3
p.P404T
c.1210C>A
1 paper
NM_005269.3
p.L403delFs
c.1209delG
1 paper
NM_005269.3
p.P407insFs
c.1220_1221insT
1 paper
NM_005269.3
p.D400E
c.1200T>A
1 paper
NM_005269.3
p.I409T
c.1226T>C
1 paper
NM_005269.3
p.D400E
c.1200T>G
1 paper
NM_005269.3
p.R398H
c.1193G>A
1 paper
NM_005269.3
p.E413*
c.1237G>T
1 paper
NM_001167609.2
p.R375_E376delFs
c.1123_1126del4
1 paper
NM_005269.3
p.D390G
c.1169A>G
1 paper
NM_005269.3
p.P389A
c.1165C>G
1 paper
NM_005269.3
p.G421S
c.1261G>A
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."