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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:IFNA10

Variant:p.D118E

IFNA10

52 papers

RefSeq Summary

This gene encodes a protein that belongs to the type I interferon family of proteins, and is located in a cluster of alpha interferon genes on chromosome 9. Interferons are small regulatory molecules ...

Pfam Domains

Interferonaa 26–185UCSCInterferon alpha/beta domain

Gene Aliases

HGNC Name

interferon alpha 10

HGNC Alias Symbol

IFN-alphaC

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

Selected Variant

3 papers

chr9:21206744 G>C

NM_002171.2

p.D118E

c.354C>G

Interferon

exact variant not in gnomAD42 overlapping SVs

Surrounding Variants

3 papers

chr9:21206744 G>T

NM_002171.2

p.D118E

c.354C>A

Interferon

Exome: 4.1% (AC=59467, hom=1469)Genome: 3.1% (AC=4737, hom=94)42 overlapping SVs

5 papers

chr9:21206725 G>A

NM_002171.2

p.Q125*

c.373C>T

Interferon

Exome: 0.1% (AC=1379, hom=12)Genome: 0.8% (AC=1142, hom=26)42 overlapping SVs

4 papers

chr9:21206764 G>T

NM_002171.2

p.L112I

c.334C>A

Interferon

Exome: 17.5% (AC=256188, hom=24918)Genome: 19.6% (AC=29555, hom=3166)42 overlapping SVs

1 paper

chr9:21206714 C>G

NM_002171.2

p.G128G

c.384G>C

Interferon

Exome: 0.0% (AC=56, hom=0)Genome: 0.0% (AC=6, hom=0)42 overlapping SVs

1 paper

chr9:21206790 C>T

NM_002171.2

p.S103N

c.308G>A

Interferon

exact variant not in gnomAD42 overlapping SVs

2 papers

chr9:21206845 G>A

NM_002171.2

p.Q85*

c.253C>T

Interferon

Exome: 0.0% (AC=357, hom=8)Genome: 0.3% (AC=463, hom=6)41 overlapping SVs

6 papers

chr9:21206606 C>A

NM_002171.2

p.W164C

c.492G>T

Interferon

exact variant not in gnomAD42 overlapping SVs

6 papers

chr9:21206606 C>G

NM_002171.2

p.W164C

c.492G>C

Interferon

Exome: 1.0% (AC=14619, hom=97)Genome: 0.8% (AC=1142, hom=9)42 overlapping SVs

1 paper

chr9:21206602 C>T

NM_002171.2

p.V166I

c.496G>A

Interferon

Exome: 0.6% (AC=8378, hom=24)Genome: 0.4% (AC=603, hom=4)42 overlapping SVs

1 paper

chr9:21206914 G>A

NM_002171.2

p.P62S

c.184C>T

Interferon

Exome: 0.0% (AC=7, hom=0)Genome: 0.0% (AC=2, hom=0)41 overlapping SVs

3 papers

chr9:21206917 T>A

NM_002171.2

p.I61F

c.181A>T

Interferon

Exome: 4.3% (AC=62597, hom=1725)Genome: 5.6% (AC=8492, hom=348)41 overlapping SVs

1 paper

chr9:21206570 C>A

NM_002171.2

p.S176S

c.528G>T

Interferon

Exome: 0.0% (AC=354, hom=0)Genome: 0.0% (AC=12, hom=0)41 overlapping SVs

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