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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:IGDCC4

Variant:p.R10R

IGDCC4

15q22.31 (UCSC)OMIM GTEx

75 papers

Pfam Domains

I-setaa 143–230UCSCImmunoglobulin I-set domain

Ig_3aa 245–315UCSCImmunoglobulin domain

I-setaa 335–422UCSCImmunoglobulin I-set domain

fn3aa 430–521UCSCFibronectin type III domain

fn3aa 527–619UCSCFibronectin type III domain

fn3aa 631–730UCSCFibronectin type III domain

Gene Aliases

HGNC Name

immunoglobulin superfamily DCC subclass member 4

HGNC Alias Symbols

NOPE; LOC57722

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

Selected Variant

chr15:65422833 G>A

NM_020962.3

p.R10R

c.30C>T

Exome: 20.8% (AC=223088, hom=26908)Genome: 20.7% (AC=31001, hom=4240)14 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."