Varaico: Literature-Extracted Genetic Variants

Gene:KIT
Variant:p.H40fs

KIT

4,821 papers

RefSeq Summary

This gene encodes a receptor tyrosine kinase. This gene was initially identified as a homolog of the feline sarcoma viral oncogene v-kit and is often referred to as proto-oncogene c-Kit. The canonical...

Pfam Domains

igaa 219–304UCSCImmunoglobulin domain
Ig_PDGFR_d4aa 421–542UCSCPlatelet-derived growth factor receptor Ig-like domain 4
PK_Tyr_Ser-Thraa 590–924UCSCProtein tyrosine and serine/threonine kinase

Gene Aliases

HGNC Name

KIT proto-oncogene, receptor tyrosine kinase

HGNC Previous Symbol

PBT

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
2 papers
NM_000222.3
p.H40fs
c.118_119fs
Surrounding Variants
1 paper
NM_000222.3
p.H40N
c.118C>A
2 papers
NM_000222.3
p.H40fs
c.118_119fs
2 papers
NM_000222.3
p.H40Y
c.118C>T
1 paper
NM_000222.3
p.H40delFs
c.119_120delAT
1 paper
NM_000222.3
p.H40R
c.119A>G
1 paper
NM_000222.3
p.H40L
c.119A>T
4 papers
NM_000222.3
p.I39M
c.117C>G
5 papers
NM_000222.3
p.H40Q
c.120T>A
6 papers
NM_000222.3
p.H40Q
c.120T>G
1 paper
NM_000222.3
p.I39_H40insGGC
c.115_119ins9
2 papers
NM_000222.3
p.I39V
c.115A>G
1 paper
NM_000222.3
p.I39F
c.115A>T
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."